Biodiversity Information Science and Standards :
Conference Abstract
|
Corresponding author: Adeline Kerner (kerner@mnhn.fr)
Received: 10 Sep 2021 | Published: 10 Sep 2021
© 2021 Adeline Kerner, Sylvain Bouquin, Rémy Portier, Régine Vignes Lebbe
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Kerner A, Bouquin S, Portier R, Vignes Lebbe R (2021) The 8 Years of Existence of Xper3: State of the art and future developments of the platform. Biodiversity Information Science and Standards 5: e74250. https://doi.org/10.3897/biss.5.74250
|
|
The Xper3 platform was launched in November 2013 (
Each knowledge base is autonomous and can be published as a free access key link, as a data paper in publications or on websites. The risk of this autonomy and lack of visibility to already existing knowlege bases is possible duplicated content or overlapping effort. Increasingly, users have asked for a public overview of the existing content. A first version of a searching tool is now available online. Explorer lists the databases whose creators have filled in the extended metadata and have accepted the referencing. The user can search by language, taxonomic group, fossil or current, geography, habitat, and key words.
New developments of Xper3 are in progress. Some have a first version online, others are in production and the last ones are future projects. We will present an overview of the different projects in progress and for the future.
Calculated descriptors are a distinctive feature of Xper3 (
The link between Xper3 and Annotate continues to improve (
Future developments are in progress that will modify the Xper3 architecture in order to have the same functionalities in both local and online versions and to allow various user interfaces from the same knowledge bases. Xper2-specific features, such as merging states, adding notes, adding definitions and/or illustrations in the description tab, having different ways of sorting and filtering the descriptors during an identification (by groups, identification power, alphabetic order, specialist’s choice) have to be added to Xper3.
A new tab in Xper3’s interface is being implemented to give an access to various analysis tools, via API (Application Programming Interface), or R programming code:
One last project that we would like to implement is an interoperability between Xper3, platforms with biodiversity data (e.g., Global Biodiversity Information Facility, GBIF) and bio-ontologies. An ID field already exists to add Universally Unique IDentifiers (UUID) for taxa. ID fields have to be added for descriptors and states to link them with ontologies e.g., Phenotypic Quality Ontology PATO, Plant Ontology PO.
We are interested in discussing future developments to further improve the user interface and develop new tools for the analysis of knowledge bases.
interactive key, computer-aided identification systems, knowledge base, collection, Annotate, Xper 2
Adeline Kerner
TDWG 2021